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R – translating Python class to R’s R6 class – error

I saw a similar post on here about this error but my code is a bit different. I’m converting a python class from a tool called ‘graphST’ (https://github.com/JinmiaoChenLab/GraphST/blob/d62b0b7b6cd38ee285f3ac8cd67b7341a10bcc74/GraphST/GraphST.py).