I encountered an installation failure while trying to install the omicverse module. Using conda/mamba, I followed the recommended steps from the installation guide at https://omicverse.readthedocs.io/en/latest/Installation_guild/. However, when I proceeded to install omicverse, the following error occurred:
(omicverse) F:>mamba install omicverse -c conda-forge
Looking for: ['omicverse']
conda-forge/win-64 Using cache
conda-forge/noarch Using cache
pkgs/main/win-64 No change
pkgs/main/noarch No change
pkgs/msys2/win-64 No change
pkgs/r/noarch No change
pkgs/msys2/noarch No change
pkgs/r/win-64 No change
Pinned packages:
- python 3.10.*
Could not solve for environment specs
The following package could not be installed
└─ omicverse is not installable because it requires
└─ scikit-misc >=0.1 , which does not exist (perhaps a missing channel).
(omicverse) F:>pip install scikit-misc
Collecting scikit-misc
Downloading scikit_misc-0.4.0-cp310-cp310-win_amd64.whl.metadata (5.0 kB)
Requirement already satisfied: numpy>=1.23.5 in c:userscannminiforge-pypy3envsomicverselibsite-packages (from scikit-misc) (1.26.4)
Downloading scikit_misc-0.4.0-cp310-cp310-win_amd64.whl (10.0 MB)
---------------------------------------- 10.0/10.0 MB 1.5 MB/s eta 0:00:00
Installing collected packages: scikit-misc
Successfully installed scikit-misc-0.4.0
(omicverse) F:>mamba install omicverse -c conda-forge
Looking for: ['omicverse']
conda-forge/win-64 Using cache
conda-forge/noarch Using cache
pkgs/main/noarch No change
pkgs/r/win-64 No change
pkgs/r/noarch No change
pkgs/main/win-64 No change
pkgs/msys2/noarch No change
pkgs/msys2/win-64 No change
Pinned packages:
- python 3.10.*
Could not solve for environment specs
The following package could not be installed
└─ omicverse is not installable because it requires
└─ scikit-misc >=0.1 , which does not exist (perhaps a missing channel).
I have checked that my CUDA version is compatible, and the environment is using Python 3.10 as recommended by the installation guide (the same issue occurs with Python 3.12).
What should I do next to successfully install omicverse?
Any help would be greatly appreciated. Thank you!
Jiang is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.