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Question

I am using a bash script to create a conda environment for a project. The bash script uses mamba create command. I have installed mamba using their official guide. However, when I run the script, I get an error saying that;

RuntimeError: Download error (28) Timeout was reached [https://conda.anaconda.org/conda-forge/linux-64/cudnn-8.9.7.29-hbc23b4c_3.conda]
    Operation too slow. Less than 30 bytes/sec transferred the last 60 seconds

Here I have attached the output from my terminal. Please note the list of packages section was removed to make it shorter.

> bash setup-env.sh my-conda-env

Looking for: ['transformers', 'python=3.10', 'pytorch', 'fairscale', 'dask-mongo', 'torchaudio', 'pytorch-cuda=11.7', 'iopath', 'cudatoolkit=11.7']

pytorch/linux-64                                            Using cache
pytorch/noarch                                              Using cache
nvidia/linux-64                                             Using cache
nvidia/noarch                                               Using cache
conda-forge/linux-64                                        Using cache
conda-forge/noarch                                          Using cache
iopath/linux-64                                               No change
iopath/noarch                                                 No change
warning  libmamba Package tarball '/home/akila-i/miniforge3/pkgs/ucx-1.14.1-h64cca9d_5.conda' is invalid
warning  libmamba Package tarball '/home/akila-i/miniforge3/pkgs/libopenblas-0.3.27-pthreads_h413a1c8_0.conda' is invalid
warning  libmamba Package tarball '/home/akila-i/miniforge3/pkgs/libgoogle-cloud-2.12.0-hac9eb74_1.conda' is invalid
warning  libmamba Package tarball '/home/akila-i/miniforge3/pkgs/libcufft-10.7.2.124-h4fbf590_0.tar.bz2' is invalid
warning  libmamba Package tarball '/home/akila-i/miniforge3/pkgs/libnpp-11.7.4.75-0.tar.bz2' is invalid
Transaction

  Prefix: /home/akila-i/miniforge3/envs/picssmart

  Updating specs:

   - transformers
   - python=3.10
   - pytorch
   - fairscale
   - dask-mongo
   - torchaudio
   - pytorch-cuda=11.7
   - iopath
   - cudatoolkit=11.7


  Package                    Version  Build                     Channel           Size
────────────────────────────────────────────────────────────────────────────────────────
  Install:
────────────────────────────────────────────────────────────────────────────────────────
-- List is removed as its too long --

Summary:

  Install: 201 packages

  Total download: 3GB

────────────────────────────────────────────────────────────────────────────────────────

This is error report

Download error (28) Timeout was reached [https://conda.anaconda.org/conda-forge/linux-64/cudnn-8.9.7.29-hbc23b4c_3.conda]
Operation too slow. Less than 30 bytes/sec transferred the last 60 seconds

# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

    Traceback (most recent call last):
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/conda/exception_handler.py", line 17, in __call__
        return func(*args, **kwargs)
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 959, in exception_converter
        raise e
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 952, in exception_converter
        exit_code = _wrapped_main(*args, **kwargs)
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 898, in _wrapped_main
        result = do_call(parsed_args, p)
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 767, in do_call
        exit_code = create(args, parser)
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 602, in create
        return install(args, parser, "create")
      File "/home/akila-i/miniforge3/lib/python3.10/site-packages/mamba/mamba.py", line 558, in install
        transaction.fetch_extract_packages()
    RuntimeError: Download error (28) Timeout was reached [https://conda.anaconda.org/conda-forge/linux-64/cudnn-8.9.7.29-hbc23b4c_3.conda]
    Operation too slow. Less than 30 bytes/sec transferred the last 60 seconds

`$ /home/akila-i/miniforge3/bin/mamba create -n my-conda-env transformers python=3.10 pytorch fairscale dask-mongo torchaudio pytorch-cuda=11.7 iopath cudatoolkit=11.7 -c pytorch -c nvidia -c iopath -c conda-forge -y`

  environment variables:
                 CIO_TEST=<not set>
        CONDA_DEFAULT_ENV=base
                CONDA_EXE=/home/akila-i/miniforge3/bin/conda
             CONDA_PREFIX=/home/akila-i/miniforge3
    CONDA_PROMPT_MODIFIER=(base)
         CONDA_PYTHON_EXE=/home/akila-i/miniforge3/bin/python
               CONDA_ROOT=/home/akila-i/miniforge3
              CONDA_SHLVL=1
           CURL_CA_BUNDLE=<not set>
               LD_PRELOAD=<not set>
                     PATH=/home/akila-i/miniforge3/bin:/home/akila-
                          i/miniforge3/condabin:/usr/bin/flutter/bin:/home/akila-
                          i/.nvm/versions/node/v22.0.0/bin:/home/akila-i/.console-ninja/.bin:/ho
                          me/akila-
                          i/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/
                          bin:/usr/games:/usr/local/games:/snap/bin:/snap/bin
       REQUESTS_CA_BUNDLE=<not set>
            SSL_CERT_FILE=<not set>
               WINDOWPATH=2

     active environment : base
    active env location : /home/akila-i/miniforge3
            shell level : 1
       user config file : /home/akila-i/.condarc
 populated config files : /home/akila-i/miniforge3/.condarc
          conda version : 24.3.0
    conda-build version : not installed
         python version : 3.10.14.final.0
                 solver : libmamba (default)
       virtual packages : __archspec=1=icelake
                          __conda=24.3.0=0
                          __cuda=12.2=0
                          __glibc=2.39=0
                          __linux=6.8.0=0
                          __unix=0=0
       base environment : /home/akila-i/miniforge3  (writable)
      conda av data dir : /home/akila-i/miniforge3/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.anaconda.org/pytorch/linux-64
                          https://conda.anaconda.org/pytorch/noarch
                          https://conda.anaconda.org/nvidia/linux-64
                          https://conda.anaconda.org/nvidia/noarch
                          https://conda.anaconda.org/iopath/linux-64
                          https://conda.anaconda.org/iopath/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
          package cache : /home/akila-i/miniforge3/pkgs
                          /home/akila-i/.conda/pkgs
       envs directories : /home/akila-i/miniforge3/envs
                          /home/akila-i/.conda/envs
               platform : linux-64
             user-agent : conda/24.3.0 requests/2.31.0 CPython/3.10.14 Linux/6.8.0-31-generic ubuntu/24.04 glibc/2.39 solver/libmamba conda-libmamba-solver/24.1.0 libmambapy/1.5.8
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False


An unexpected error has occurred. Conda has prepared the above report.
If you suspect this error is being caused by a malfunctioning plugin,
consider using the --no-plugins option to turn off plugins.

Example: conda --no-plugins install <package>

Alternatively, you can set the CONDA_NO_PLUGINS environment variable on
the command line to run the command without plugins enabled.

Example: CONDA_NO_PLUGINS=true conda install <package>

I have tried reinstalling conda as well. But I could not get this resolved. Anyone knows why it is occuring and how to solve?

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How to fix mamba install timeout error on ubuntu