I tried to install the python package “pysam” via conda into my NGStools env by running:
conda install -c bioconda pysam
but the server returned:
Channels:
- bioconda
- conda-forge
- defaults
Platform: osx-arm64
Collecting package metadata (repodata.json): done
Solving environment: failed
PackagesNotFoundError: The following packages are not available from current channels:
- pysam
Current channels:
- https://conda.anaconda.org/bioconda
- https://conda.anaconda.org/conda-forge
- defaults
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
the website of bioconda also shows that pysam should be available.
Is this a problem on my side or is pysam currently unavailable?
TL;DR
- I tried to install pysam in my NGStools conda env via bioconda.
- I expected pysam to be downloaded and correctly added to my env.
- Instead I received the error: PackageNotFoundError
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