I have installed Rcpp, RcppParallel and I was testing simple function, written in .cpp file.
#include <RcppParallel.h>
#include <Rcpp.h>
#include <vector>
using namespace RcppParallel;
using namespace Rcpp;
struct Sum : public Worker {
// Source vector
const std::vector<int> &input;
// Accumulated value
int value;
// Constructor
Sum(const std::vector<int> &input) : input(input), value(0) {}
// Split constructor
Sum(const Sum &sum, Split) : input(sum.input), value(0) {}
// Accumulate values in the given range
void operator()(std::size_t begin, std::size_t end) {
value += std::accumulate(input.begin() + begin, input.begin() + end, 0);
}
// Join the accumulated values
void join(const Sum &rhs) {
value += rhs.value;
}
};
// [[Rcpp::export]]
int parallelSum(const std::vector<int> &x) {
Sum sum(x);
// Call parallelReduce to start the work
parallelReduce(0, x.size(), sum);
return sum.value;
}
then:
sourceCpp("UntitledCPP.cpp")
It gave me:
sourceCpp("UntitledCPP.cpp")
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
g++ -std=gnu++17 -I"C:/PROGRA~1/R/R-44~1.1/include" -DNDEBUG -I"C:/Users/callimae/AppData/Local/R/win-library/4.3/Rcpp/include" -I"C:/Users/callimae/Documents/Projects/NewEM_conjugate_base" -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c UntitledCPP.cpp -o UntitledCPP.o
UntitledCPP.cpp:1:10: fatal error: RcppParallel.h: No such file or directory
1 | #include <RcppParallel.h>
| ^~~~~~~~~~~~~~~~
compilation terminated.
make: *** [C:/PROGRA~1/R/R-44~1.1/etc/x64/Makeconf:296: UntitledCPP.o] Error 1
Error in sourceCpp("UntitledCPP.cpp") :
Error 1 occurred building shared library.
While i specified full path to RcppParallel, it asked about tinythread instead.
I have new version of R and Rtools. My session info:
sessionInfo()
R version 4.4.1 (2024-06-14 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 22631)
Matrix products: default
locale:
[1] LC_COLLATE=Polish_Poland.utf8 LC_CTYPE=Polish_Poland.utf8 LC_MONETARY=Polish_Poland.utf8 LC_NUMERIC=C
[5] LC_TIME=Polish_Poland.utf8
time zone: Europe/Warsaw
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] RcppArmadillo_14.0.0-1 RcppParallel_5.1.8 Rcpp_1.0.12
loaded via a namespace (and not attached):
[1] compiler_4.4.1 magrittr_2.0.3 cli_3.6.3 tools_4.4.1 fs_1.6.4 glue_1.7.0 rstudioapi_0.16.0 vctrs_0.6.5
[9] usethis_2.2.3 lifecycle_1.0.4 rlang_1.1.4 purrr_1.0.2
I have reinstalled all rcpp packages as well.
Do you have any ideas?
Kind regards,
Mateusz